linktree

linktree is a novel framework that leverages transmission chain data to estimate group transmission assortativity; this quantifies the extent to which individuals transmit within their own group compared to others. The methodology is described in our paper.

Installation

# install.packages("devtools")
# devtools::install_github("CyGei/linktree")
library(linktree)

Documentation

For more information, check the vignette.